BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007B10LP1|AL425647
(830 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1279 1600 0.0
>3x_Contig1279
Length = 6618
Score = 1600 bits (806), Expect = 0.0
Identities = 823/830 (99%)
Strand = Plus / Plus
Query: 1 atccactgtcgctcaattggtccaaacattggaacaacacgatgctttgaagtactccat 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4912 atccactgtcgctcaattggtccaaactttggaacaacacgatgctttgaagtactccat 4971
Query: 61 cawtgttgctgctactgcttctgaagccgctccattgcaatacattgctcctttcactgc 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4972 cattgttgctgctactgcttctgaagccgctccattgcaatacattgctcctttcactgc 5031
Query: 121 tgccgctatcggtgaatggttcagagacaacggtagaaacgctttgatcatctacgacga 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 5032 tgccgctatcggtgaatggttcagagacaacggtagacacgctttgatcatctacgacga 5091
Query: 181 tttgtccaagcaagccgttgcataccgtcaattgtctctattattgagacgtccacctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5092 tttgtccaagcaagccgttgcataccgtcaattgtctctattattgagacgtccacctgg 5151
Query: 241 tagagaagcttaccctggtgatgttttctacttacattccagattgttggaaagagctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5152 tagagaagcttaccctggtgatgttttctacttacattccagattgttggaaagagctgc 5211
Query: 301 caagatgtctgaaaagaacggtggtggttctttgaccgctttgccagttattgaaactca 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5212 caagatgtctgaaaagaacggtggtggttctttgaccgctttgccagtcattgaaactca 5271
Query: 361 aggtggtgatgtttccgcttatattccaaccaacgttatttccattaccgatggtcaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5272 aggtggtgatgtttccgcttatattccaaccaacgttatttccattaccgatggtcaaat 5331
Query: 421 tttcttggaagctgaattgttctacaagggtatcagaccagctattaacgtcggtttgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5332 tttcttggaagctgaattgttctacaagggtatcagaccagctattaacgtcggtttgtc 5391
Query: 481 tgtctctcgtgtcggttccgccgctcaagttaaggctttgaagcaagttgctggttcctt 540
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 5392 tgtctctcgtgtcggttccgccgctcaagtcaaggctttgaagcaagtcgctggttcctt 5451
Query: 541 gaagttgtttttggcccaatacagagaagtcgctgccttcgcccaattcggttccgattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5452 gaagttgtttttggcccaatacagagaagtcgctgccttcgcccaattcggttccgattt 5511
Query: 601 ggatgcttctaccaagcaaaccttggctagaggtgaaagattgacccaattgttgaagca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5512 ggatgcttctaccaagcaaaccttggctagaggtgaaagattgacccaattgttgaagca 5571
Query: 661 aaaccaatactctccattggctgctgaagaacaagttccattgatttacgccggtgtcaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5572 aaaccaatactctccattggctgctgaagaacaagttccattgatttacgccggtgtcaa 5631
Query: 721 cggttacttggataacattgatatttccagaatcgccgaattcgaaaccaagttcttggc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5632 cggttacttggataacattgatatttccagaatcgccgaattcgaaaccaagttcttggc 5691
Query: 781 ttacttgaaggctaaccacgacgaaatcgtctctkctatcagagaaaagg 830
|||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5692 ttacttgaaggctaaccacgacgaaatcgtctctgctatcagagaaaagg 5741
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5883
Number of Sequences: 1807
Number of extensions: 5883
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 830
length of database: 10,358,551
effective HSP length: 16
effective length of query: 814
effective length of database: 10,329,639
effective search space: 8408326146
effective search space used: 8408326146
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)